NICA lab members are marked in bold.

International Journal & Conference

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C2. S. Han, E.-S. Cho, I. Park, K. Shin, Y.-G. Yoon.

Efficient Neural Network Approximation of Robust PCA for Automated Analysis of Calcium Imaging Data,

International Conference on Medical Image Computing and Computer Assisted Intervention (MICCAI), 2021. (accepted)

with prof. Kijung Shin's group @ KAIST

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C1. C. Shin*, H. Ryu*, E.-S. Cho,  Y.-G. Yoon.

RLP-Net: A Recursive Light Propagation Network for 3-D Virtual Refocusing,

International Conference on Medical Image Computing and Computer Assisted Intervention (MICCAI), 2021. (accepted) (*co-first authors)

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J4. J. Sim, C. E Park, I. Cho, K. Min, J.-S. Lee, Y. Chong, J. Kim, J. S. Kang, K. D. Piatkevich, E. E. Jung, S.-K. Kwon, Y.-G. Yoon, E. S. Boyden, J.-B. Chang.

Whole-ExM: Expansion microscopy imaging of all anatomical structures of whole larval zebrafish,

https://doi.org/10.1101/2021.05.18.443629, bioRxiv, 2021. 

with prof. Jae-Byum Chang's group @ KAIST

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J3. J. Seo*, Y. Sim*, J. W. Kim*, H. Kim, I. Cho, Y.-G. Yoon**, J.-B. Chang**.
PICASSO: Ultra-multiplexed fluorescence imaging of biomolecules through single-round imaging and blind source unmixing, https://doi.org/10.1101/2021.01.27.428247, bioRxiv, 2021. (*co-first authors, **co-corresponding authors)

with prof. Jae-Byum Chang's group @ KAIST

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J2. Y-.G. Yoon*, Z. Wang*, N. Pak, D. Park, P. Dai, J. S. Kang, H-.J. Suk, P. Symvoulidis, B. Guner-Ataman, K. Wang**, and E. S. Boyden**.

Sparse decomposition light-field microscopy for high speed imaging of neuronal activity

Optica, doi.org/10.1364/OPTICA.392805, Oct 2020. (*co-first authors, **co-corresponding authors)

with prof. Ed Boyden's group @ MIT

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J1. O. A. Shemesh, C. Linghu, K. D. Piatkevich, D. Goodwin, O. T. Celiker, H. J. Gritton, M. F. Romano, R. Gao, C-.C Yu, H-.A. Tseng, S. Bensussen, S. Narayan, C-.T. Yang, L. Freifeld, C. A. Siciliano, I. Gupta, J. Wang, N. Pak, Y-.G. Yoon, J. F.P. Yllmann, B. Guner-Ataman, H. Noamany, Z. R. Sheinkopf, W. M. Park, S. Asano, A. E. Keating, J. S. Trimmer, J. Reimer, A. S. Tolias, M. F. Bear, K. M. Tye, X. Han, M. B. Ahrens, E. S. Boyden.

Precision Calcium Imaging of Dense Neural Populations via a Cell-Body-Targeted Calcium Indicator.

Neuron, doi.org/10.1016/j.neuron.2020.05.029, Aug 2020.

with prof. Ed Boyden's group @ MIT

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Before Joining KAIST

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International Journal

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7. K. D. Piatkevich, E. E. Jung, C. Straub, C. Linghu, D. Park, H.-J. Suk, D. R. Hochbaum, D. Goodwin, E. Pnevmatikakis, N. Pak, C.-T. Yang, J. L. Rhoades, O. Shemesh, S. Asano, Y.-G. Yoon, L. Freifeld, J. Saulnier, C. Riegler, F. Engert, T. Hughes, M. Drobizhev, B. Szabo, M. B. Ahrens, S. W. Flavell, B. L. Sabatini, and E. S. Boyden.

Robotic multidimensional directed evolution of proteins: development and application to fluorescent voltage reporters.

Nature Chemical Biology, doi.org/10.1038/s41589-018-0004-9, Feb 2018.

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6. Y.-G. Yoon, P. Dai, J. Wohlwend, J.-B. Chang, A. H. Marblestone**, and E. S. Boyden**.

Feasibility of 3D Reconstruction of Neural Circuits using Expansion Microscopy and Barcode-Guided Agglomeration.

Front. Comput. Neurosci., doi.org/10.3389/fncom.2017.00097, Oct 2017. (**co-corresponding authors)

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5. J.-B. Chang, F. Chen, Y.-G. Yoon, E. E. Jung, H. Babcock, J. S. Kang, S. Asano, H.-J. Suk, N. Pak, P. W. Tillberg, A. Wassie, D. Cai, and E. S. Boyden.

Iterative expansion microscopy.

Nature Methods, doi.org/10.1038/nmeth.4261, vol. 14, no. 6, Jun 2017.

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4. R. Prevedel*, Y.-G. Yoon*, M. Hoffmann, N. Pak, G. Wetzstein, S. Kato, T. Schrödel, R. Raskar, M. Zimmer, E.S. Boyden**, and A. Vaziri**.

Simultaneous whole-animal 3D imaging of neuronal activity using light-field microscopy

Nature Methods, doi.org/10.1038/nmeth.2964, vol. 11, no. 7, Jul 2014. (*co-first authors, **co-corresponding authors)

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3. T.-K. Jang, J. Kim, Y.-G. Yoon, and S.H. Cho.

A Highly-Digital VCO-based Analog-to-Digital Converter using Phase Interpolator and Digital Calibration.

IEEE Trans. VLSI, vol. 20, no. 8, Aug 2012.

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2. J. Kim, T.-K. Jang, Y.-G. Yoon, and S.H. Cho.

Design and Analysis of Voltage-Controlled Oscillator-based Analog-to-Digital Converter.

IEEE Trans. Circuits Syst. I, vol. 57, no. 1, Jan 2010.

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1. Y.-G. Yoon, J. Kim, T.-K. Jang, and S.H. Cho.

A Time-based Bandpass ADC using Time-Interleaved Voltage-Controlled Oscillators.

IEEE Trans. Circuits Syst. I, vol. 55, no. 11, Dec 2008. (received 2009 IEEE Circuits and Systems Society Guillemon-Cauer Best Paper Award)

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International Conferences

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14. Y.-G. Yoon*, Z. Wang*, D. Park, N. Pak, J. Kang, H.-J. Suk, P. Dai, K. Wang, and E. S. Boyden.

Sparse decomposition light-field microscopy for high speed 3-D imaging of neuronal activity.

Society for Neuroscience (SfN), Nov. 2018. (*co-first authors)

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13. K. D. Piatkevich, E. E. Jung, C. Straub, C. Linghu, D. Park, H.-J. Suk, D. R. Hochbaum, D. Goodwin, E. Pnevmatikakis, N. Pak, C.-T. Yang, J. L. Rhoades, O. Shemesh, S. Asano, Y.-G. Yoon, L. Freifeld, J. Saulnier, C. Riegler, F. Engert, T. Hughes, M. Drobizhev, B. Szabo, M. B. Ahrens, S. W. Flavell, B. L. Sabatini, and E. S. Boyden.

Robust, millivolt-resolution, high-speed neural voltage imaging in multiple species

Society for Neuroscience (SfN), Nov. 2018. 

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12. O. A. Shemesh, C. Linghu, K. D. Piatkevich, D. Goodwin, H. J. Gritton, M. F. Romano, H. Tseng, S. Bensussen, S. Narayan, C.-T. Yang, L. Freifeld, C. Siciliano, I. Gupta, N. Pak, Y.-G. Yoon, J. Ullmann, Z. R. Sheinkopf, W. M. Park, K. Tye, A. E. Keating, J. Reimer, A. Tolias, X. Han, M. B. Ahrens, and E. S. Boyden.

Precision calcium imaging of dense neural populations via a cell body-targeted calcium indicator.

Society for Neuroscience (SfN), Nov. 2018. 

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11. J.-B. Chang, F. Chen, Y.-G. Yoon, E. Jung, H. Babcock, J. Kang, S. Asano, H.-J. Suk, N. Pak, P. Tillberg, A. Wassie, X. Zhuang, E. S. Boyden.

20-nm resolution imaging of brain circuitry by next-generation expansion microscopy.

Society for Neuroscience (SfN), Nov. 2016.

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10. Y.-G. Yoon, P. Dai, J. Wohlwend, J.-B. Chang, A. Marblestone**, and E. S. Boyden**.

3-D reconstruction of neural circuits using expansion microscopy.

Society for Neuroscience (SfN), Nov. 2016. (**co-corresponding authors)

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9. Y.-G. Yoon*, N. Pak*, L. Freifeld*, M. A. Henninger, J. Deguchi, N. Savidis, and E. S. Boyden.

Sparse reconstruction light-field microscopy for high-resolution 3d-imaging of neuronal activity.

Society for Neuroscience (SfN), Oct. 2015. (*co-first authors)

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8. R. Prevedel*, Y.-G. Yoon*, M. Hoffmann, N. Pak, G. Wetzstein, S. Kato, T. Schrödel, R. Raskar, M. Zimmer, E. S. Boyden**, and A. Vaziri**.

Simultaneous whole-animal 3D imaging of neuronal activity using light-field microscopy.

Society for Neuroscience (SfN), Oct. 2014. (*co-first authors, **co-corresponding authors)

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7. T.-H. Kim, Y.-G. Yoon, J. Uhm, D.-W. Jeong, S. Z. Yoon, and S.-H. Park.

A Cepstral Analysis based Method for Quantifying the Depth of Anesthesia from Human EEG.

IEEE International Conference in Medicine and Biology Society (EMBC), Jul. 2013.

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6. Y.-G. Yoon, T.-H. Kim, D.-W. Jeong, and S.-H, Park.

Monitoring the Depth of Anesthesia from rat EEG using Modified Shannon Entropy Analysis.

IEEE International Conference in Medicine and Biology Society (EMBC), Aug. 2011.

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5. Y.-G. Yoon, S.-H, Park, and S. H. Cho.

A Time-based Noise Shaping Analog-to-Digital Converter using a Gated-Ring Oscillator.

IEEE International Microwave Workshop Series (IMWS) on Intelligent Radio for Future Personal Terminals, Aug. 2011.

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4. Y.-G. Yoon, M.-C. Cho, and S.H. Cho.

A Linearization Technique for Voltage-Controlled Oscillator-based ADC.

IEEE International SoC Design Conference, Nov. 2009.

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3. M.-C. Cho, Y.-G. Yoon, and S.H. Cho.

Design of Highly Programmable Bio-impedance Measurement IC.

IEEE International SoC Design Conference, Nov. 2009.

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2. S. Bang, C. Lee, M.-C. Cho, Y.-G. Yoon, and S.H. Cho.

A Pulse Transit Time Measurement Method Based on Electrocardiography and Bioimpedance.

IEEE Biomedical Circuits and Systems Conference, Nov. 2009.

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1. Y.-G. Yoon and S.H. Cho.

A 1.5-GHz 63dB SNR 20mW Direct RF Sampling Bandpass VCO-based ADC in 65nm CMOS.

IEEE Symposium on VLSI Circuits, pp.270-271, Jul. 2009.

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